prof. RNDr. Julius Lukeš, CSc.

Job Position: Director , Head of Laboratory - Laboratory of Molecular Biology of Protists

Contact details

Phone: +420 387775416
E-mail: jula@paru.cas.cz
Web: www.paru.cas.cz
Room: 002 / PARU II

Description

Management and Leadership of the Institute of Parasitology

Curriculum vitae

 

Professional Experience

· 1991-present: Research Scientist, Institute of Parasitology, České Budějovice
· 1992-2012: Member of the Scientific Board of the Institute of Parasitology
· 1993: Postdoctoral Fellow, E.C.Slater Institute, University of Amsterdam, The Netherlands
· 1995-present: Head of the Laboratory of Molecular Parasitology, Institute of Parasitology
· 1994-1997: Assistant, Faculty of Biology, University of South Bohemia, České Budějovice
· 1997-1998: Postdoctoral Fellow, Department of Biology, University of California, Riverside
· 1998-1999: Visiting Scientist, Molecular Biology Institute, University of California, Los Angeles
· 2003-2012: Chair of the Department of Molecular Biology, University of South Bohemia
· 2006-present: Professor, Faculty of Biology, University of South Bohemia
· 2007-2012: Member of the Scientific Board of the Faculty of Natural Sciences
· 2008-present: Member of the Scientific Board of the Faculty of Agriculture
· 2008-2012: Head of the Scientific Board of the Institute of Parasitology
· 2012-present: Director of the Institute of Parasitology
· 2012-present: Committee member of International Society of Protistologists

Honors and Awards

· 1993: EMBO Fellowship
· 1994-1996: Chairman of the Czech Society of Protozoology
· 1995: Fulbright Travel Grant
· 1997: Young Scientist Award of the President of the Czech Academy of Sciences
· 2000-2005: European Councillor of the International Society for Evolutionary Protistology
· 2006-2008: President of the International Society for Evolutionary Protistology
· 2002: Prize of the Czech Academy of Sciences for outstanding young researchers
· 2003-2009: President of the Czech Society of Protozoology
· 2004-present: Member of the Learned Society of the Czech Republic
· 2007: Prize of the Czech Academy of Sciences
· 2007-2009: Vice-president of the International Society of Protistologists
· 2009-2011: Associate of the Canadian Institute for Advanced Research
· 2011: Prize of the Minister of Education for Excellence in Research
· 2012-present: Fellow of the Canadian Institute for Advanced Research

Invited Lectures

· University of Hannover, Germany, 1991
· University of Amsterdam, The Netherlands, 1993, 1994, 2003
· University of Arizona, Tucson, USA, 1995
· State University of New York, Stony Brook, USA, 1995
· National Institutes of Health, Bethesda, USA, 1995
· Wesleyan University, Middletown, USA, 1997
· Johns Hopkins University, Baltimore, USA, 1997, 2000
· University of California, Los Angeles, USA, 1998, 1999, 2002
· Charles University, Prague, Czech Republic, 1999, 2006, 2007
· School of Hygiene and Tropical Medicine, London, UK, 2000
· Institute of Cytology, St. Petersburg, Russia, 2001
· De Duve Institute of Pathology, Brussels, Belgium, 2002, 2006
· Max-Planck-Institute for Molecular Physiology, Dortmund, Germany, 2002
· Comenius University, Bratislava, Slovakia, 2003, 2008
· CIRAD, Montpellier, France, 2003
· Sun Yat-Sen University, Guangzhou, China, 2003, 2006, 2007, 2012
· Humboldt University, Berlin, Germany, 2004
· University of Wroclaw, Wroclaw, Poland, 2004
· Oregon Health & Science University, Portland, USA, 2004
· New York University, New York, USA, 2004
· University of Oxford, Oxford, UK, 2004
· University of Melbourne, Melbourne, Australia, 2005
· Canadian Institute for Advanced Research, Vancouver, Canada, 2005, 2006
· Foundation Oswaldo Cruz, Fiocruz, Rio de Janeiro, Brazil, 2005
· University of Rio de Janeiro, Rio de Janeiro, Brazil, 2005
· Seattle Biomedical Research Institute, Seattle, USA, 2006, 2010
· Université de Montréal, Montréal, Canada, 2006
· South Medical University, Guangzhou, China, 2006
· Kuvin Centre, Hebrew University, Jerusalem, Israel, 2006
· Technion-Institute of Technology, Haifa, Israel, 2006
· University of California, Riverside, USA, 2007
· Philipps University, Marburg, Germany, 2008
· University of Glasgow, Glasgow, U.K., 2008
· Newcastle University, U.K., 2008
· Canadian Institute for Advanced Research, Quebec, Canada, 2008
· University of Cambridge, U.K., 2008
· Dalhousie University, Halifax, Canada, 2008
· Trinity College, Dublin, Ireland, 2008
· University of Bern, Switzerland, 2008
· University of California, Irvine, USA, 2009
· Ohio State University, Columbus, USA, 2009
· University of Cardiff, Cardiff, U.K., 2010
· University of Brasilia, Brasilia, Brazil, 2010
· Tokyo University, Tokyo, Japan, 2010
· Seattle Biomed, Seattle, USA, 2010, 2012
· Ohio State University, Columbus, USA, 2011
· King Abdulah University, Thuwal, Saudi Arabia, 2011
· Molecular Biology Laboratory, Cambridge, U.K., 2011
· University of Heidelberg, Heidelberg, Germany, 2011
· European Molecular Biology Laboratory, Heidelberg, Germany, 2011, 2012
· University of Queensland, Australia, 2011
· Biodiversity Institute, University of British Columbia, Vancouver, Canada, 2012
· University of Strathclyde, Glasgow, U.K., 2012
· University of California, Riverside, USA, 2012
· Philipps University, Marburg, Germany, 2012
· National Institutes of Alergy and Infectious Diseases, Bethesda, USA, 2012
· University of Pennsylvania, Philadelphia, USA, 2012
· University of Exeter, Exeter, U.K., 2012
· Chinese Agricultural University, Beijing, China, 2012

Editorial Board

· 2004-2006: Protistology
· 2005-2011: Journal of Eukaryotic Microbiology
· 2004-2008: Kinetoplastid Biology and Diseases
· 2009-present: The Open Parasitology Journal
· 2010-2012: International Journal for Parasitology
· 2011-2012: Folia Parasitologova (Associate Editor)

Principal organizer of conferences

· XIII. biannual meeting of the International Society for Evolutionary Protistology – August 2000 (120 participants)
· Trypanosomiasis and Leishmaniasis seminar of the British Society of Parasitology – August 2004 (140 participants)
· Euroleish Meeting – September 2004 (30 participants)
· Mitochondrion of trypanosomes enters the post-proteomic era – September 2009 (70 participants)

Teaching Biochemistry and Molecular Biology of Parasites
Faculty of Science University of South Bohemia

Biology of Parasitic Protozoa
Faculty of Science, University of South Bohemia

Principles of Molecular Biology
Faculty of Science University of South Bohemia

Publications
Total found: 260 records
Butenko A., da Silva V.T., Frolov A., Opperdoes F., Soares R.P., Kostygov A., Lukeš J., Yurchenko V. (2018) Leptomonas pyrrhocoris: genomic insight into parasite’s physiology Current Genomics 19 : 150-156.
DOI: 10.2174/1389202918666170815143331

Documents to download:
Butenko et al. CurrGenomics 2018 (pdf)
Flegontova O., Flegontov P., Malviya S., Poulain J., de Vargas C., Bowler C., Lukeš J., Horák A. (2018) Neobodonids are dominant kinetoplastids in the global ocean Environmental Microbiology 20 : 878-889.
DOI: 10.1111/1462-2920.14034

Documents to download:
Flegontova_et.al_2018 (pdf)
Gerasimov E.S., Gasparyan A.A., Kaurov I., Tichý B., Logacheva M., Kolesnikov A., Lukeš J., Yurchenko V., Zimmer S., Flegontov P. (2018) Trypanosomatid mitochondrial RNA editing: dramatically complex transcript repertoires revealed with a dedicated mapping tool Nucleic Acids Research 46 : 765-781.
DOI: 10.1093/nar/gkx1202

Documents to download:
Gerasimov et al. 2018 (pdf)
Grybchuk D., Akopyants N., Kostygov A., Konovalovas A., Lye L., Dobson D., Zangger H., Fasel N., Butenko A., Frolov A., Votýpka J., d’Avila-Levy C., Kulich P., Moravcová J., Plevka P., Rogozin I.B., Serva S., Lukeš J., Beverley S., Yurchenko V. (2018) Viral discovery and diversity in trypanosomatids with a focus on relatives of the human parasite Leishmania Proceedings of the National Academy of Sciences of the United States of America 115 : E506-E515.
DOI: 10.1073/pnas.1717806115

Documents to download:
Grybchuk et al. 2018 PNAS (pdf)
Ishemgulova A., Hlaváčová J., Majerová K., Butenko A., Lukeš J., Votýpka J., Volf P., Yurchenko V. (2018) CRISPR/Cas9 in Leishmania mexicana: A case study of LmxBTN1 PLOS ONE 13 : e0192723.
DOI: 10.1371/journal.pone.0192723

Documents to download:
Ishemgulova et al. 2018 PLOS ONE (pdf)
Kaur B., Valach M., Pena Diaz C., Moreira S., Keeling P., Burger G., Lukeš J., Faktorová D. (2018) Transformation of Diplonema papillatum, the type species of the highly diverse and abundant marine micro-eukaryotes Diplonemida (Euglenozoa Environmental Microbiology 20 : 1030-1040.
DOI: 10.1111/1462-2920.14041

Documents to download:
Kaur_et_al._Environmental Microbiology_2018 (pdf)
Schwelm A., Badstöber J., Bulman S., Desoignies N., Etemadi M., Falloon R.E., Gachon C. M., Legreve A., Lukeš J., Merz U., Nenarokova A., Strittmatter M., Sullivan B.K., Neuhauser A.S. (2018) Not in your usual Top 10: protists that infect plants and algae Molecular Plant Pathology 19 : 1029-1044.
DOI: 10.1111/mpp.12580

Documents to download:
Schwelm et al. 2018 MPP (pdf)
Tashyreva D., Prokopchuk G., Votýpka J., Yabuki A., Horák A., Lukeš J. (2018) Life cycle, ultrastructure, and phylogeny of new diplonemids and their endosymbiotic bacteria mBio 9 : e02447-17.
DOI: 10.1128/mBio.02447-17

Documents to download:
Tashyreva et al. 2018 mBio (pdf)
Tashyreva D., Prokopchuk G., Yabuki A., Kaur B., Faktorová D., Votýpka J., Kusaka Ch., Fujikura K. , Shiratori T., Ishida K., Horák A., Lukeš J. (2018) Phylogeny and morphology of new diplonemids from Japan Protist 169 : 158–179.
DOI: 10.1016/j.protis.2018.02.001

Documents to download:
Tashyreva_et.al_Protist_2018 (pdf)
Akhoundi M., Downing T., Votýpka J., Kuhls K., Lukeš J., Cannet A., Ravel C., Marty P., Delaunay P., Kasbari M., Granouillac B., Gradoni L., Sereno D. (2017) Leishmania infections: Molecular targets and diagnosis Molecular Aspects of Medicine 57 : 1-29.
DOI: 10.1016/j.mam.2016.11.012

Documents to download:
Akhoundi et al. 2017 MAM (pdf)
Benz C., Stříbrná E., Hashimi H., Lukeš J. (2017) Dynamin-like proteins in Trypanosoma brucei: A division of labour between two paralogs? PLoS ONE 12 : e0177200.
DOI: 10.1371/journal.pone.0177200

Documents to download:
Benz et al. 2017 PLoS ONE (pdf)
Dixit S., Müller-McNicoll M., David V., Zarnack K., Ule J., Hashimi H., Lukeš J. (2017) Differential Binding of Mitochondrial Transcripts by MRB8170 and MRB4160 Regulates Distinct Editing Fates of Mitochondrial mRNA in Trypanosomes mBio 8 : e02288-16.
DOI: 10.1128/mBio.02288-16

Documents to download:
Dixit et al. 2017 mBio (pdf)
Haindrich A., Boudová M., Vancová M., Pena Diaz C., Horáková E., Lukeš J. (2017) The intermembrane space protein Erv1 of Trypanosoma brucei is essential for mitochondrial Fe-S cluster assembly and operates alone Molecular and Biochemical Parasitology 214 : 47-51.
DOI: 10.1016/j.molbiopara.2017.03.009

Documents to download:
Haindrich et al. 2017 MBP (pdf)
Horáková E., Changmai P., Vancová M., Sobotka R., Van Den Abbeele J., Vanhollebeke B., Lukeš J. (2017) The Trypanosoma brucei TbHrg protein is a heme transporter involved in regulation of stage-specific morphological transitions The Journal of Biological Chemistry 292 : 6998-7010.
DOI: 10.1074/jbc.M116.762997

Documents to download:
Horakova et al. 2017 (pdf)
Ishemgulova A., Butenko A., Kortišová L., Boucinha C., Grybchuk-Ieremenko A., Morelli K., Tesařová M., Kraeva N., Grybchuk D., Pánek T., Flegontov P., Lukeš J., Votýpka J., Pavan M.G., Opperdoes F., Spodareva V., D'avila-Levy C., Kostygov A., Yurchenko V. (2017) Molecular mechanisms of thermal resistance of the insect trypanosomatid Crithidia thermophila PLoS ONE 12 : e0174165.
DOI: 10.1371/journal.pone.0174165

Documents to download:
Ishemgulova et al. 2017 PLoS ONE (pdf)
Ishemgulova A., Kraeva N., Hlaváčová J., Zimmer S., Podešvová L., Butenko A., Leštinová T., Lukeš J., Kostygov A. , Votýpka J., Volf P., Yurchenko V. (2017) A putative ATP/GTP binding protein affects Leishmania mexicana growth in insect vectors and vertebrate hosts PLOS Neglected Tropical Diseases 11 : e0005782.
DOI: 10.1371/journal.pntd.0005782

Documents to download:
Ishemgulova et al. 2017 PNTD (pdf)
Kostygov A. , Butenko A., Nenarokova A., Tashyreva D., Flegontov P., Lukeš J., Yurchenko V. (2017) Genome of Ca. Pandoraea novymonadis, an Endosymbiotic Bacterium of the Trypanosomatid Novymonas esmeraldas Frontiers in Microbiology 8 : 1940.
DOI: 10.3389/fmicb.2017.01940

Documents to download:
Kostygov et al. 2017 FiM (pdf)
Kraeva N., Horáková E., Kostygov A., Kořený L., Butenko A., Yurchenko V., Lukeš J. (2017) Catalase in Leishmaniinae: With me or against me? Infection, Genetics and Evolution 50 : 121-127.
DOI: 10.1016/j.meegid.2016.06.054

Documents to download:
Kraeva et al. 2017 JBCh (pdf)
Pena Diaz C., Vancová M., Resl C., Field M., Lukeš J. (2017) A leucine aminopeptidase is involved in kinetoplast DNA segregation in Trypanosoma brucei PloS Pathogens 13 : e1006310.
DOI: 10.1371/journal.ppat.1006310

Documents to download:
Pena-Diaz et al. 2017 (pdf)
Seward E., Votýpka J., Kment P., Lukeš J., Kelly S. (2017) Description of Phytomonas oxycareni n. sp. from the Salivary Glands of Oxycarenus lavaterae Protist 168 : 71-79.
DOI: 10.1016/j.protis.2016.11.002

Documents to download:
Seward et al. 2017 Protist (pdf)

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CONTACT

Biology Centre CAS
Institute of Parasitology
Branišovská 1160/31
370 05 České Budějovice

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