Seznam publikací

Celkem nalezeno: 87 záznamů
del Campo J., Carlos-Oliveira M., Čepička I., Hehenberger E., Horák A., Karnkowska A., Kolísko M., Lara E., Lukeš J., Pánek T., Piwosz K., Richter D.J., Škaloud P., Šuťák R., Tachezy J., Hampl V. (2024) The protist cultural renaissance Trends in Microbiology 32: 128-131.
DOI: 10.1016/j.tim.2023.11.010
Lukeš J., Čepička I., Kolísko M. (2024) Evolution: No end in sight for novel incredible (heterotrophic) protists Current Biology 34: R53–R74.
DOI: 10.1016/j.cub.2023.10.065

Dokumenty ke stažení:
Lukes_2024_CurrBiol (pdf)
Rotterová J., Pánek T., Salomaki E., Kotyk M., Táborský P., Kolísko M., Čepička I. (2024) Single cell transcriptomics reveals UAR codon reassignment in Palmarella salina (Metopida, Armophorea) and confirms Armophorida belongs to APM clade Molecular Phylogenetics and Evolution 191: 107991.
DOI: 10.1016/j.ympev.2023.107991
Brabec J., Rochat E.C., Knudsen R., Scholz T., Blasco-Costa I. (2023) Mining various genomic resources to resolve old alpha-taxonomy questions: a test of the species hypothesis of the Proteocephalus longicollis species complex (Cestoda: Platyhelminthes) from salmonid fishes (Cestoda: Platyhelminthes). International Journal for Parasitology 53: 197–205.
DOI: 10.1016/j.ijpara.2022.12.005
Hehenberger E., Boscaro V., James E., Hirakawa Y., Trznadel M., Mtawali M., Fiorito R., del Campo J., Karnkowska A., Kolísko M., Irwin N.A.T., Mathur V., Scheffrahn R., Keeling P. (2023) New Parabasalia symbionts Snyderella spp. and Daimonympha gen. nov. from South American Rugitermes termites and the parallel evolution of a cell with a rotating "head" Journal of Eukaryotic Microbiology 70: e12987.
DOI: 10.1111/jeu.12987
Hehenberger E., Guo J., Wilken S., Hoadley K., Sudek L., Poirier C., Dannebaum R., Susko E., Worden A. (2023) Phosphate limitation responses in marine green algae are linked to reprogramming of the tRNA epitranscriptome and codon usage bias Molecular Biology and Evolution 40: msad251.
DOI: 10.1093/molbev/msad251
Holt C.C., Hehenberger E., Tikhonenkov D.V., Jacko-Reynolds V.K.L., Okamoto N., Cooney E.C., Irwin N.A.T., Keeling P. (2023) Multiple parallel origins of parasitic Marine Alveolates Nature Communications 14: 7049.
DOI: 10.1038/s41467-023-42807-0
Kachale A., Pavliková Z., Nenarokova A., Roithová A., Durante I., Miletínová P., Záhonová K., Nenarokov S., Votýpka J., Horáková E., Ross R.L., Yurchenko V., Beznosková P., Paris Z., Valášek L.S., Lukeš J. (2023) Short tRNA anticodon stem and mutant eRF1 allow stop codon reassignment Nature 613: 751–758.
DOI: 10.1038/s41586-022-05584-2

Dokumenty ke stažení:
Kachale_2023_Nature (pdf)
Marick J., Brabec J., Choudhury A., Scholz T., Ash A. (2023) The evolution of an ancient tapeworm lineage in its catfish hosts: vicariance, dispersal and diversification in Gangesiinae (Cestoda: Proteocephalidae) Zoological Journal of the Linnean Society 198: 509–533.
DOI: 10.1093/zoolinnean/zlac098
Mathur V., Salomaki E., Wakeman K.C., Na I., Kwong W.K., Kolísko M., Keeling P. (2023) Reconstruction of plastid proteomes of apicomplexans and close relatives reveals the major evolutionary outcomes of cryptic plastids Molecular Biology and Evolution 40: msad002.
DOI: 10.1093/molbev/msad002
Nguyen L., Taerum S.J., Jasso-Selles D.E., Slamovits C.H., Silberman J., Gile G. (2023) True molecular phylogenetic position of the cockroach gut commensal Lophomonas blattarum (Lophomonadida, Parabasalia) Journal of Eukaryotic Microbiology 70: e12988.
DOI: 10.1111/jeu.12988
Obiol A., López-Escardó D., Salomaki E., Wisniewska M., Forn I., Sà E., Vaqué D., Kolísko M., Massana R. (2023) Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory Microbiome 11: 134.
DOI: 10.1186/s40168-023-01571-5
Uribe M., Brabec J., Chaparro-Gutiérrez J.J., Hermosilla C. (2023) Neglected zoonotic helminthiases in wild canids: new insights from South America Frontiers in Veterinary Science 10: 1235182.
DOI: 10.3389/fvets.2023.1235182
Cho A., Tikhonenkov D.V., Hehenberger E., Karnkowska A., Mylnikov A.P., Keeling P. (2022) Monophyly of diverse Bigyromonadea and their impact on phylogenomic relationships within stramenopiles Molecular Phylogenetics and Evolution 171: 107468.
DOI: 10.1016/j.ympev.2022.107468
Decelle J., Kayal E., Bigeard E., Gallet B., Bougoure J., Clode P., Schieber N., Templin R., Hehenberger E., Prensier G., Chevalier F., Schwab Y., Guillou L. (2022) Intracellular development and impact of a marine eukaryotic parasite on its zombified microalgal host The ISME Journal 16: 2348-2359.
DOI: 10.1038/s41396-022-01274-z
Lisnerová M., Martínek I., Alama Bermejo G., Bouberlová K., Schaeffner B., Nkabi N., Holzer A., Bartošová-Sojková P. (2022) An ancient alliance: Matching evolutionary patterns of cartilaginous fishes (Elasmobranchii) and chloromyxid parasites (Myxozoa) Infection Genetics and Evolution 103: 105346.
DOI: 10.1016/j.meegid.2022.105346
Vargová R., Hanousková P., Salamonová J., Žihala D., Silberman J., Eliáš M., Čepička I. (2022) Evidence for an independent hydrogenosome-to-mitosome transition in the CL3 lineage of fornicates Frontiers in Microbiology 13: 866459.
DOI: 10.3389/fmicb.2022.866459
Kuchta R., Kołodziej-Sobocińska M., Brabec J., Młocicki D., Salamatin R., Scholz T. (2021) Sparganosis (Spirometra) in Europe in the molecular era Clinical Infectious Diseases 72: 882–890.
DOI: 10.1093/cid/ciaa1036
Kyslík J., Kosakyan A., Nenarokov S., Holzer A., Fiala I. (2021) The myxozoan minicollagen gene repertoire was not simplified by the parasitic lifestyle: computational identification of a novel myxozoan minicollagen gene BMC Genomics 22: 198.
DOI: 10.1186/s12864-021-07515-3
Lax G., Kolísko M., Eglit Y., Lee W.J., Yubuki N., Karnkowska A., Leander B., Burger G., Keeling J., Simpson A. (2021) Multigene phylogenetics of euglenids based on single-cell transcriptomics of diverse phagotrophs Molecular Phylogenetics and Evolution 159: 107088.
DOI: 10.1016/j.ympev.2021.107088

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