Mgr. Martin Kolísko, Ph.D.

Funkce: Vedoucí laboratoře - Laboratoř genomiky a diverzity protist

Kontaktní údaje

Telefon: +420 38777 5478
E-mail: kolisko@paru.cas.cz
Místnost: 228

Publikace
Celkem nalezeno: 25 záznamů
Lax G., Kolísko M., Eglit Y., Lee W.J., Yubuki N., Karnkowska A., Leander B., Burger G., Keeling J., Simpson A. (2021) Multigene phylogenetics of euglenids based on single-cell transcriptomics of diverse phagotrophs Molecular Phylogenetics and Evolution 159 : 107088.
DOI: 10.1016/j.ympev.2021.107088
Salomaki E., Terpis K.X., Rueckert S., Kotyk M., Varadínová Z.K., Čepička I., Lane C., Kolísko M. (2021) Gregarine single-cell transcriptomics reveals differential mitochondrial remodeling and adaptation in apicomplexans BMC Biology 19 : 77.
DOI: 10.1186/s12915-021-01007-2
Singh R.A., Boscaro V., James E., Karnkowska A., Kolísko M., Gavelis G.S., Okamoto N., del Campo J., Fiorito R., Hehenberger E., Irwin N.A.T., Mathur V., Scheffrahn R., Keeling P. (2021) Characterization of new cristamonad species from kalotermitid termites including a novel genus, Runanympha Scientific Reports 11 : 7270.
DOI: 10.1038/s41598-021-86645-w
Tice A.K., Žihala D., Pánek T., Jones R.E., Salomaki E., Nenarokov S., Burki F., Eliáš M., Eme L., Roger A., Rokas A., Shen X.X., Strassert J., Kolísko M., Brown M.M. (2021) PhyloFisher: A phylogenomic package for resolving eukaryotic relationships PLoS Biology 19 : e3001365.
DOI: 10.1371/journal.pbio.3001365
Alama Bermejo G., Myer E., Atkinson S.D., Holzer A., Wisniewska M., Kolísko M., Bartholomew J. (2020) Transcriptome-wide comparisons and virulence gene polymorphisms of host-associated genotypes of the cnidarian parasite Ceratonova shasta in salmonids. Genome Biology and Evolution 12 : 1258–1276.
DOI: 10.1093/gbe/evaa109
Kolísko M., Flegontova O., Karnkowska A., Lax G., Maritz J.M., Pánek T., Táborský P., Carlton J.M., Čepička I., Horák A., Lukeš J., Simpson A., Tai V. (2020) EukRef-excavates: seven curated SSU ribosomal RNA gene databases Database 2020 : baaa080.
DOI: 10.1093/database/baaa080

Dokumenty ke stažení:
Kolisko_2020_Database (pdf)
Lhotská Z., Jirků M., Hložková O., Brožová K., Jirsová D., Stensvold C., Kolísko M., Jirků-Pomajbíková K. (2020) A Study on the Prevalence and Subtype Diversity of the Intestinal Protist Blastocystis sp. in a Gut-Healthy Human Population in the Czech Republic Frontiers in Cellular and Infection Microbiology 10 : 544335.
DOI: 10.3389/fcimb.2020.544335
Rotterová J., Salomaki E., Pánek T., Bourland W., Žihala D., Táborský P., Edgcomb V., Beinart R.A., Kolísko M., Čepička I. (2020) Genomics of new ciliate lineages provides insight into the evolution of obligate anaerobiosis Current Biology 30 : 2037-2050.e6.
DOI: 10.1016/j.cub.2020.03.064
Salomaki E., Eme L., Brown M.W., Kolísko M. (2020) Response to Preuss and Zuccarello (2020): biological definitions that can be unambiguously applied for red algal parasites Journal of Phycology 56 : 833-835.
DOI: 10.1111/jpy.12987
Adl S.M., Bass D., Lane C., Lukeš J., Schoch C., Smirnov A., Agatha S. , Berney C., Brown M.W., Burki F., Cárdenas P., Čepička I., Chistyakova L., del Campo J., Dunthorn M., Edvardsen B., Eglit Y., Guillou L. , Hampl V., Heiss A.A., Hoppenrath M., James T.Y., Karnowska J., Karpov S., Kim E., Kolísko M., Kudryavtsev A., Lahr D.J.G., Lara E., Le Gall L., Lynn D., Mann D. G., Massana R., Mitchell E., Morrow Ch., Pawlowski J., Powel M.J., Richter D.J., Rueckert S., Shadwick L., Shimano S., Spiegel F., Torruella G., Youssef N., Zlatogursky V., Zhang Q. (2019) Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes Journal of Eukaryotic Microbiology 66 : 4–119.
DOI: 10.1111/jeu.12691

Dokumenty ke stažení:
Adl et al. 2019 (pdf)
Mathur V., Kolísko M., Hehenberger E., Irwin N.A.T., Leander B., Kristmundsson Á., Freeman M., Keeling P. (2019) Multiple Independent Origins of Apicomplexan-Like Parasites Current Biology 29 : 2936–2941.e5.
DOI: 10.1016/j.cub.2019.07.019
Treitli S.C., Kolísko M., Husník F., Keeling P., Hampl V. (2019) Revealing the metabolic capacity of Streblomastix strix and its bacterial symbionts using single-cell metagenomics. Proceedings of the National Academy of Sciences of the United States of America 39 : 19675–19684.
DOI: 10.1073/pnas.1910793116
del Campo J., Kolísko M., Boscaro V., Santoferrara F., Nenarokov S., Massana R., Guillou L. , Simpson A., Berney C., de Vargas C., Brown M.W., Keeling P., Wegener Parfrey L. (2018) EukRef: phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution PLoS Biology 16 : e2005849.
DOI: 10.1371/journal.pbio.2005849
Heiss A.A., Kolísko M., Ekelund F., Brown M.W., Roger A., Simpson A. (2018) Combined morphological and phylogenomic re-examination of malawimonads, a critical taxon for inferring the evolutionary history of eukaryotes Royal Society Open Science 5 : 171707.
DOI: 10.1098/rsos.171707
Lynn D., Kolísko M., Bourland W. (2018) Phylogenomic Analysis of Nassula variabilis n. sp., Protist 169 : 180-189.
DOI: 10.1016/j.protis.2018.02.002
Mathur V., del Campo J., Kolísko M., Keeling P. (2018) Global diversity and distribution of close relatives of apicomplexan parasites. Environmental Microbiology 20 : 8.
DOI: 10.1111/1462-2920.14134
Pyrihová E., Motyčková A., Voleman L. , Wandyszewska N., Fišer R., Seydlová G., Roger A., Roger A., Kolísko M., Doležal P. (2018) A Single Tim Translocase in the Mitosomes of Giardia intestinalis Illustrates Convergence of Protein Import Machines in Anaerobic Eukaryotes Genome Biology and Evolution 10 : 2813–2822.
DOI: 10.1093/gbe/evy215
Strassert J., Karnkowska A., Hehenberger E., del Campo J., Kolísko M., Okamoto N., Burki F., Janouškovec J., Poirier C., Leonard G., Hallam S.J., Richards T., Worden A., Santoro A., Keeling P. (2018) Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates ISME Journal 12 : 304-308.
DOI: 10.1038/ismej.2017.167
Vacek V., Novák L.V.F., Treitli S.C., Táborský P., Čepička I., Kolísko M., Keeling P., Hampl V. (2018) Fe-S Cluster Assembly in Oxymonads and Related Protists Molecular Biology and Evolution 35 : 2712–2718.
DOI: 10.1093/molbev/msy168
Boscaro V., Kolísko M., Felletti M., Vannini C., Lynn D., Keeling P. (2017) Parallel genome reduction in symbionts descended from closely related free-living bacteria Nature Ecology & Evolution 1 : 1160-1167.
DOI: 10.1038/s41559-017-0237-0

Více publikací

KONTAKT

Biologické centrum AV ČR, v.v.i.
Parazitologický ústav
Branišovská 1160/31
370 05 České Budějovice

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