List of publications

Total found: 22 records
Gu H., Huang S., Krock B., Leaw C.P., Lim P.T., Kassim N.S., Shin H.H., Roeroe K.A., Yuan H., Hosny S., Sasai R., Takahashi Takahashi Kazuya , Thoha H., Hamzah F., Ha D.V., Potisarn N., Lirdwitayaprasit T., Iwataki M. (2025) Phylogenetic analysis of the toxigenic genus Amphidinium (Amphidiniales, Dinophyceae) revealed an unexpectedly high diversity in the Asia–Pacific region. Harmful Algae 149: 102934.
DOI: 10.1016/j.hal.2025.102934
Kuwata K., Lum W.M., Takahashi Takahashi Kazuya , Benico G., Ozawa M., Uchida H., Numano S., Watanabe R., Suzuki T., Iwataki M. (2025) Diversity of amphidomatacean dinoflagellates in Japan, with a description of Azadinium inconspicuum sp. nov. and azaspiracid components in Azadinium poporum ribotypes. Harmful Algae 150: 102969.
DOI: 10.1016/j.hal.2025.102969
Nguyen J.A., Stilwell J.M., Sanderson S., Nietlisbach N.A., Long C., Leis E., Hehenberger E., Woodyard E.T., Griffin M.J., Rosser T.G. (2025) Dermisichthinium pseudosporum gen. et sp. nov. (Dinophyceae, Suessiaceae): a dinoflagellate parasite in freshwater fish in Wisconsin, USA Diseases of Aquatic Organisms 164: 67–90.
DOI: 10.3354/dao03874
Rao A.K., Yee D., Chevalier F., LeKieffre C., Pavie M., Olivetta M., Dudin O., Gallet B., Hehenberger E., Seifi M., Jug F., Deschamps J., Wu T.D., Gast R., Jouneau P.H., Decelle J. (2025) Hijacking and integration of algal plastids and mitochondria in a polar planktonic host. Current Biology 35: 2509-2523.e7.
DOI: 10.1016/j.cub.2025.03.076
Schoenle A., Francis O., Archibald J., Burki F., de Vries J., Dumack K., Eme L., Florent I., Hehenberger E., Hoffmeyer T.T., Irisarri I., Lara E., Leger M.M., Lukeš J., Massana R., Mathur V., Nitsche F. , Strassert J., Worden A., Yurchenko V., del Campo J., Waldvogel A.M. (2025) Protist genomics: key to understanding eukaryotic evolution. Trends in Genetics 41: 868-882.
DOI: 10.1016/j.tig.2025.05.004

Documents to download:
Schoenle_2025_TrendsGenetics (pdf)
Takahashi Takahashi Kazuya , Lum W.M., Benico G., Iwataki M. (2025) Description of the second peridinin-containing kareniacean species, Gertia obesa sp. nov. (Dinophyceae) and the identity of the family Kareniaceae. Phycologia 64: 519-532.
Takahashi Takahashi Kazuya , Lum W.M., Hehenberger E., Iwataki M. (2025) Kapelodiniopsis flava n. g., n. sp. (Dinophyceae), a new katodinioid with haptophyte-derived plastids of multiple origins: implications for the plastid integration process. Journal of Eukaryotic Microbiology 72: e13082.
DOI: 10.1111/jeu.13082
Cooney E.C., Holt C.C., Hehenberger E., Adams J.A., Leander B., Keeling P. (2024) Investigation of heterotrophs reveals new insights in dinoflagellate evolution Molecular Phylogenetics and Evolution 196: 108086.
DOI: 10.1016/j.ympev.2024.108086
del Campo J., Carlos-Oliveira M., Čepička I., Hehenberger E., Horák A., Karnkowska A., Kolísko M., Lara E., Lukeš J., Pánek T., Piwosz K., Richter D.J., Škaloud P., Šuťák R., Tachezy J., Hampl V. (2024) The protist cultural renaissance Trends in Microbiology 32: 128-131.
DOI: 10.1016/j.tim.2023.11.010

Documents to download:
delCampo_2024_TrendsParasitol (pdf)
Funaki C., Kuwata K., Lum W.M., Takahashi Takahashi Kazuya , Masuda T., Ichinomiya M., Katayama T., Kodama T., Iwataki M., Takahashi K. (2024) Effects of temperature and light intensity on growth in Prorocentrum cf. balticum (Dinophyceae) isolated from the Oyashio-Kuroshio Mixed Water region, North Pacific Plankton and Benthos Research 19: 191–202.
DOI: 10.3800/pbr.19.191
Hehenberger E., Burki F. (2024) CHAPTER: The extent, role, and timing of endosymbiotic gene transfer in plastids In: S.D. Schwartzbach, P.G. Kroth, M. Oborník (Eds.) Endosymbiotic Organelle Acquisition Springer, Cham: pp. 123–145.
DOI: 10.1007/978-3-031-57446-7_4
Karlicki M., Bednarska A., Hałakuc P., Maciszewski K., Karnkowska A. (2024) Spatio-temporal changes of small protist and free-living bacterial communities in a temperate dimictic lake: insights from metabarcoding and machine learning FEMS Microbiology Ecology 100: fiae104.
DOI: 10.1093/femsec/fiae104
Maciszewski K., Wilga G., Jagielski T., Bakuła Z., Gawor J., Gromadka R., Karnkowska A. (2024) Reduced plastid genomes of colorless facultative pathogens Prototheca (Chlorophyta) are retained for membrane transport genes BMC Biology 22: 294.
DOI: 10.1186/s12915-024-02089-4
Martínek I., Hernandez Orts J. (2024) Helminth fauna of the black goby Gobius niger L. (Gobiiformes: Gobiidae) from the Finnish Archipelago, Baltic Sea: molecular and morphological data. Current Research in Parasitology and Vector-Borne Diseases 5: 100169.
DOI: 10.1016/j.crpvbd.2023.100169
Hehenberger E., Boscaro V., James E., Hirakawa Y., Trznadel M., Mtawali M., Fiorito R., del Campo J., Karnkowska A., Kolísko M., Irwin N.A.T., Mathur V., Scheffrahn R., Keeling P. (2023) New Parabasalia symbionts Snyderella spp. and Daimonympha gen. nov. from South American Rugitermes termites and the parallel evolution of a cell with a rotating "head" Journal of Eukaryotic Microbiology 70: e12987.
DOI: 10.1111/jeu.12987
Hehenberger E., Guo J., Wilken S., Hoadley K., Sudek L., Poirier C., Dannebaum R., Susko E., Worden A. (2023) Phosphate limitation responses in marine green algae are linked to reprogramming of the tRNA epitranscriptome and codon usage bias Molecular Biology and Evolution 40: msad251.
DOI: 10.1093/molbev/msad251
Holt C.C., Hehenberger E., Tikhonenkov D.V., Jacko-Reynolds V.K.L., Okamoto N., Cooney E.C., Irwin N.A.T., Keeling P. (2023) Multiple parallel origins of parasitic Marine Alveolates Nature Communications 14: 7049.
DOI: 10.1038/s41467-023-42807-0
Cho A., Tikhonenkov D.V., Hehenberger E., Karnkowska A., Mylnikov A.P., Keeling P. (2022) Monophyly of diverse Bigyromonadea and their impact on phylogenomic relationships within stramenopiles Molecular Phylogenetics and Evolution 171: 107468.
DOI: 10.1016/j.ympev.2022.107468
Decelle J., Kayal E., Bigeard E., Gallet B., Bougoure J., Clode P., Schieber N., Templin R., Hehenberger E., Prensier G., Chevalier F., Schwab Y., Guillou L. (2022) Intracellular development and impact of a marine eukaryotic parasite on its zombified microalgal host The ISME Journal 16: 2348-2359.
DOI: 10.1038/s41396-022-01274-z
Lisnerová M., Martínek I., Alama Bermejo G., Bouberlová K., Schaeffner B., Nkabi N., Holzer A., Bartošová-Sojková P. (2022) An ancient alliance: Matching evolutionary patterns of cartilaginous fishes (Elasmobranchii) and chloromyxid parasites (Myxozoa) Infection Genetics and Evolution 103: 105346.
DOI: 10.1016/j.meegid.2022.105346

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