Gerasimov E.S., Afonin D.A.,
Škodová-Sveráková I., Saura A., Trusina N.,
Gahura O., Zakharova A., Butenko A., Baráth P., Horváth A., Opperdoes F.R., Pérez-Morgai D., Zimmer S.,
Lukeš J., Yurchenko V. (2025) Evolutionary divergent kinetoplast genome structure and RNA editing patterns in the trypanosomatid Vickermania. Proceedings of the National Academy of Sciences of the United States of America
122
: e2426887122.
DOI: 10.1073/pnas.2426887122
Documents to download:
Gerasimov_2025_PNAS (pdf)
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Ribeiro P., Butenko A., Linke D., Ghanavi H.R., Meier J.I., Wahlberg N., Matos Maravi P. F. (2025) Pervasive horizontal transmission of Wolbachia in natural populations of closely related and widespread tropical skipper butterflies BMC Microbiology
22
: 5.
DOI: 10.1186/s12866-024-03719-1
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Bartošová-Sojková P., Butenko A., Richtová J.,
Fiala I.,
Oborník M.,
Lukeš J. (2024) Inside the host: understanding the evolutionary trajectories of intracellular parasitism ANNUAL REVIEW OF MICROBIOLOGY
78
: 3.1–3.21.
DOI: 10.1146/annurev-micro-041222-025305
Documents to download:
Bartosova-Sojkova_2024_AnnRep (pdf)
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Butenko A.,
Lukeš J., Speijer D., Weideman J.G. (2024) Mitochondrial genomes revisited: Why dodifferent lineages retain different genes? BMC Biology
22
: 15.
DOI: 10.1186/s12915-024-01824-1
Documents to download:
Butenko_2024_BMCBiol (pdf)
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Chmelová L., Kraeva N., Saura A., Krayzel A., Vieira C.S., Neves Ferreira T., Soares R.P., Bučková B., Galan A.,
Horáková E., Ganyukova A., Malysheva M., Butenko A.,
Prokopchuk G., Frolov A.,
Lukeš J., Horváth A.,
Škodová-Sveráková I., Feder D., Kostygov A., Yurchenko V. (2024) Intricate balance of dually-localized catalase in /Leptomonas seymouri/ (Kinetoplastea: Trypanosomatidae) modulates infectivity International Journal for Parasitology
54
: 391-400.
DOI: 10.1016/j.ijpara.2024.04.007
Documents to download:
Chmelova_2024_IntJParasitol (pdf)
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Grybchuk D., Galan A., Klocek D., Macedo D.H., Wolf Y.I.,
Votýpka J., Butenko A.,
Lukeš J., Neri U.,
Záhonová K., Kostygov A., Koonin E.V., Yurchenko V. (2024) Identification of diverse RNA viruses in Obscuromonas flagellates (Euglenozoa: Trypanosomatidae: Blastocrithidiinae) Virus Evolution
10
: veae037.
DOI: 10.1093/ve/veae037
Documents to download:
Grybchuk_2024_VirEvol (pdf)
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Kostygov A. , Skýpalová K., Kraeva N., Kalita E., McLeod C., Yurchenko V.,
Field M.,
Lukeš J., Butenko A. (2024) Comprehensive analysis of the Kinetoplastea intron landscape reveals a novel intron-containing gene and the first exclusively trans-splicing eukaryote BMC Biology
22
: 281.
DOI: 10.1186/s12915-024-02080-z
Documents to download:
Kostygov_2024_BMCBiol (pdf)
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Kostygov A., Albanaz A.T.S., Butenko A., Gerasimov E.S.,
Lukeš J., Yurchenko V. (2024) Phylogenetic framework to explore trait evolution in Trypanosomatidae Trends in Parasitology
40
: 2.
DOI: 10.1016/j.pt.2023.11.009
Documents to download:
Kostygov_2024_TrendsParasitol (pdf)
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Markowitz L.M., Nearman A., Zhao Z., Boncristiani D., Butenko A., de Pablos L.M., Marin A., Xu G., Machado C.A., Schwarz R.S., Palmer-Young E.C., Evans J.D. (2024) Somy evolution in the honey bee infecting trypanosomatid parasite, Lotmaria passim G3-Genes Genomes Genetics
15
: jkae258.
DOI: 10.1093/g3journal/jkae258
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Albanaz A.T.S., Carrington M., Frolov A., Ganyukova A., Gerasimov E.S.,
Lukeš J., Malysheva M.,
Votýpka J., Zakharova A.,
Záhonová K., Zimmer S., Yurchenko V., Butenko A. (2023) Shining the spotlight on the neglected: new high-quality genome assemblies as a gateway to understanding the evolution of Trypanosomatidae BMC Genomics
24
: 471.
DOI: 10.1186/s12864-023-09591-z
Documents to download:
Albanaz_2023 (pdf)
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Prokopchuk G., Butenko A.,
Dacks J., Speijer D.,
Field M.,
Lukeš J. (2023) Lessons from the deep: mechanisms behind diversification of eukaryotic protein complexes Biological Reviews
98
: 1910–1927.
DOI: 10.1111/brv.12988
Documents to download:
Prokopchuk_2023_BiolRev (pdf)
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Valach M., Moreira S., Petitjean C.,
Benz C., Butenko A.,
Flegontova O.,
Nenarokova A.,
Prokopchuk G., Batstone T., Lapébie P., Lemogo L., Sarrasin M., Stretenowich P., Tripathi P., Yazaki E., Nara T., Henrissat B., Lang B.F., Gray M., Williams T.A.,
Lukeš J., Burger G. (2023) Recent expansion of metabolic versatility in Diplonema papillatum, the model species of a highly speciose group of marine eukaryotes. BMC Biology
21
: 99.
DOI: 10.1186/s12915-023-01563-9
Documents to download:
Valach_2023_BMC (pdf)
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Zakharova A., Saura A., Morales J.,
Tashyreva D., Butenko A.,
Svobodová M., Poschmann G., Nandipati S., Zakharovová A., Noyvert D.,
Gahura O.,
Týč J., Stühler K., Kostygov A., Nowack E.C.M.,
Lukeš J., Yurchenko V. (2023) A neo-functionalized homolog of host transmembrane protein controls localization of bacterial endosymbionts in the trypanosomatid Novymonas esmeraldas Current Biology
33
: 2690-2701.
DOI: 10.1016/j.cub.2023.04.060
Documents to download:
Zakharova_2023_CB (pdf)
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Lukeš J.,
Kachale A.,
Votýpka J., Butenko A.,
Field M. (2022) African trypanosome strategies for conquering new hosts and territories: the end of monophyly? Trends in Parasitology
38
: 9.
DOI: 10.1016/j.pt.2022.05.011
Documents to download:
Lukes_2022_TrensParasitol (pdf)
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Tashyreva D., Simpson A.,
Prokopchuk G.,
Škodová-Sveráková I., Butenko A.,
Hammond M., George E.E.,
Flegontova O.,
Záhonová K.,
Faktorová D., Yabuki A.,
Horák A., Keeling P.,
Lukeš J. (2022) Diplonemids - A Review on "New" Flagellates on the Oceanic Block Protist
173
: 125868.
DOI: 10.1016/j.protis.2022.125868
Documents to download:
Tashyreva_2022_Protist (pdf)
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Zakharova A., Albanaz A.T.S., Opperdoes F.R.,
Škodová-Sveráková I., Zagirova D., Saura A., Chmelová L., Gerasimov E.S., Leštinová T., Bečvář T., Sádlová J., Volf P.,
Lukeš J., Horváth A., Butenko A., Yurchenko V. (2022) Leishmania guyanensis M4147 as a new LRV1-bearing model parasite: Phosphatidate phosphatase 2-like protein controls cell cycle progression and intracellular lipid content PLoS Neglected Tropical Diseases
16
: e0010510.
DOI: 10.1371/journal.pntd.0010510
Documents to download:
Zakharova_2022_PlosNeglTropDis (pdf)
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Albanaz A.T.S., Gerasimov E.S., Shaw J.J., Sádlová J.,
Lukeš J., Volf P., Opperdoes F.R., Kostygov A., Butenko A., Yurchenko V. (2021) Genome snalysis of endotrypanum and porcisia spp., closest phylogenetic relatives of Leishmania, highlights the role of amastins in shaping pathogenicity Genes
12
: 444.
DOI: 10.3390/genes12030444
Documents to download:
Albanas_2021_Genes (pdf)
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Butenko A.,
Hammond M.,
Field M., Ginger M., Yurchenko V.,
Lukeš J. (2021) Reductionist Pathways for Parasitism in Euglenozoans? Expanded Datasets Provide New Insights Trends in Parasitology
37
: 100–116.
DOI: 10.1016/j.pt.2020.10.001
Documents to download:
Butenko_2021_TrendsPar (pdf)
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Opperdoes F.R., Butenko A., Zakharova A., Gerasimov E.S., Zimmer S.,
Lukeš J., Yurchenko V. (2021) The Remarkable Metabolism of Vickermania ingenoplastis: Genomic Predictions Pathogens
10
: E68.
DOI: 10.3390/pathogens10010068
Documents to download:
Opperdoes_2021_Pathogens (pdf)
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Poláková E.,
Záhonová K., Albanaz A.T.S., Butenko A.,
Lukeš J., Yurchenko V. (2021) Diverse telomeres in trypanosomatids Parasitology
148
: 1254–1270.
DOI: 10.1017/S0031182021000378
Documents to download:
Polakova_2021_Parasitology (pdf)
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