Mgr. Martin Kolísko, Ph.D.
Job Position: Head of Laboratory - Laboratory of Genomics and Diversity of Protists
Phone:
+420 38777 5478
E-mail:
kolisko@paru.cas.cz
Room:
228
| Total found: 28 records
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Mathur V.,
Salomaki E., Wakeman K.C., Na I., Kwong W.K., Kolísko M., Keeling P. (2023) Reconstruction of plastid proteomes of apicomplexans and close relatives reveals the major evolutionary outcomes of cryptic plastids Molecular Biology and Evolution
40
: msad002. DOI: 10.1093/molbev/msad002 |
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Lax G., Kolísko M., Eglit Y., Lee W.J., Yubuki N., Karnkowska A., Leander B., Burger G., Keeling J., Simpson A. (2021) Multigene phylogenetics of euglenids based on single-cell transcriptomics of diverse phagotrophs Molecular Phylogenetics and Evolution
159
: 107088. DOI: 10.1016/j.ympev.2021.107088 |
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Salas-Leiva D.E., Tromer E.C., Curtis B., Jerlström-Hultqvist J., Kolísko M., Yi Z., Salas-Leiva J.S., Gallot-Lavallée L., Williams S.K., Kops G., Archibald J. M., Simpson A., Roger A. (2021) Genomic analysis finds no evidence of canonical eukaryotic DNA processing complexes in a free-living protist Nature Communications
12
: 6003. DOI: 10.1038/s41467-021-26077-2 |
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Salomaki E., Terpis K.X., Rueckert S., Kotyk M., Varadínová Z.K., Čepička I., Lane C., Kolísko M. (2021) Gregarine single-cell transcriptomics reveals differential mitochondrial remodeling and adaptation in apicomplexans BMC Biology
19
: 77. DOI: 10.1186/s12915-021-01007-2 |
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Singh R.A., Boscaro V., James E., Karnkowska A., Kolísko M., Gavelis G.S., Okamoto N., del Campo J., Fiorito R., Hehenberger E., Irwin N.A.T., Mathur V., Scheffrahn R., Keeling P. (2021) Characterization of new cristamonad species from kalotermitid termites including a novel genus, Runanympha Scientific Reports
11
: 7270. DOI: 10.1038/s41598-021-86645-w |
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Stairs C.W., Táborský P.,
Salomaki E., Kolísko M., Pánek T., Eme L., Hradilová M., Vlček Č., Jerlström-Hultqvist J., Roger A., Čepička I. (2021) Anaeramoebae are a divergent lineage of eukaryotes that shed light on the transition from anaerobic mitochondria to hydrogenosomes Current Biology
31
: 5605-5612.e5. DOI: 10.1016/j.cub.2021.10.010 |
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Tice A.K., Žihala D., Pánek T., Jones R.E.,
Salomaki E.,
Nenarokov S., Burki F., Eliáš M., Eme L., Roger A., Rokas A., Shen X.X., Strassert J., Kolísko M., Brown M.M. (2021) PhyloFisher: A phylogenomic package for resolving eukaryotic relationships PLoS Biology
19
: e3001365. DOI: 10.1371/journal.pbio.3001365 |
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Alama Bermejo G., Myer E., Atkinson S.D.,
Holzer A.,
Wisniewska M., Kolísko M., Bartholomew J. (2020) Transcriptome-wide comparisons and virulence gene polymorphisms of host-associated genotypes of the cnidarian parasite Ceratonova shasta in salmonids. Genome Biology and Evolution
12
: 1258–1276. DOI: 10.1093/gbe/evaa109 |
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Kolísko M.,
Flegontova O., Karnkowska A., Lax G., Maritz J.M., Pánek T.,
Táborský P., Carlton J.M., Čepička I.,
Horák A.,
Lukeš J., Simpson A., Tai V. (2020) EukRef-excavates: seven curated SSU ribosomal RNA gene databases Database
2020
: baaa080. DOI: 10.1093/database/baaa080 Documents to download: Kolisko_2020_Database (pdf) |
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Lhotská Z.,
Jirků M.,
Hložková O.,
Brožová K.,
Jirsová D., Stensvold C., Kolísko M.,
Jirků-Pomajbíková K. (2020) A Study on the Prevalence and Subtype Diversity of the Intestinal Protist Blastocystis sp. in a Gut-Healthy Human Population in the Czech Republic Frontiers in Cellular and Infection Microbiology
10
: 544335. DOI: 10.3389/fcimb.2020.544335 |
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Rotterová J.,
Salomaki E., Pánek T., Bourland W., Žihala D.,
Táborský P., Edgcomb V., Beinart R.A., Kolísko M., Čepička I. (2020) Genomics of new ciliate lineages provides insight into the evolution of obligate anaerobiosis Current Biology
30
: 2037-2050.e6. DOI: 10.1016/j.cub.2020.03.064 |
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Salomaki E., Eme L., Brown M.W., Kolísko M. (2020) Response to Preuss and Zuccarello (2020): biological definitions that can be unambiguously applied for red algal parasites Journal of Phycology
56
: 833-835. DOI: 10.1111/jpy.12987 |
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Adl S.M., Bass D., Lane C.,
Lukeš J., Schoch C., Smirnov A., Agatha S. , Berney C., Brown M.W., Burki F., Cárdenas P., Čepička I., Chistyakova L., del Campo J., Dunthorn M., Edvardsen B., Eglit Y., Guillou L. , Hampl V., Heiss A.A., Hoppenrath M., James T.Y., Karnowska J., Karpov S., Kim E., Kolísko M., Kudryavtsev A., Lahr D.J.G., Lara E., Le Gall L., Lynn D., Mann D. G., Massana R., Mitchell E., Morrow Ch., Pawlowski J., Powel M.J., Richter D.J., Rueckert S., Shadwick L., Shimano S., Spiegel F., Torruella G., Youssef N., Zlatogursky V., Zhang Q. (2019) Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes Journal of Eukaryotic Microbiology
66
: 4–119. DOI: 10.1111/jeu.12691 Documents to download: Adl et al. 2019 (pdf) |
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Mathur V., Kolísko M., Hehenberger E., Irwin N.A.T., Leander B., Kristmundsson Á., Freeman M., Keeling P. (2019) Multiple Independent Origins of Apicomplexan-Like Parasites Current Biology
29
: 2936–2941.e5. DOI: 10.1016/j.cub.2019.07.019 |
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Treitli S.C., Kolísko M., Husník F., Keeling P., Hampl V. (2019) Revealing the metabolic capacity of Streblomastix strix and its bacterial symbionts using single-cell metagenomics. Proceedings of the National Academy of Sciences of the United States of America
39
: 19675–19684. DOI: 10.1073/pnas.1910793116 |
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del Campo J., Kolísko M., Boscaro V., Santoferrara F., Nenarokov S., Massana R., Guillou L. , Simpson A., Berney C., de Vargas C., Brown M.W., Keeling P., Wegener Parfrey L. (2018) EukRef: phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution PLoS Biology
16
: e2005849. DOI: 10.1371/journal.pbio.2005849 |
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Heiss A.A., Kolísko M., Ekelund F., Brown M.W., Roger A., Simpson A. (2018) Combined morphological and phylogenomic re-examination of malawimonads, a critical taxon for inferring the evolutionary history of eukaryotes Royal Society Open Science
5
: 171707. DOI: 10.1098/rsos.171707 |
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Lynn D., Kolísko M., Bourland W. (2018) Phylogenomic Analysis of Nassula variabilis n. sp., Protist
169
: 180-189. DOI: 10.1016/j.protis.2018.02.002 |
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Mathur V., del Campo J., Kolísko M., Keeling P. (2018) Global diversity and distribution of close relatives of apicomplexan parasites. Environmental Microbiology
20
: 8. DOI: 10.1111/1462-2920.14134 |
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Pyrihová E., Motyčková A., Voleman L. , Wandyszewska N., Fišer R., Seydlová G., Roger A., Roger A., Kolísko M., Doležal P. (2018) A Single Tim Translocase in the Mitosomes of Giardia intestinalis Illustrates Convergence of Protein Import Machines in Anaerobic Eukaryotes Genome Biology and Evolution
10
: 2813–2822. DOI: 10.1093/gbe/evy215 |
