List of publications

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Total found: 548 records
Del Pino R.C., Zoltner M., Butterfield E.R., Field M. (2026) Evolution, composition and functions of cullin E3 ubiquitin ligases in trypanosomes. Scientific Reports 16: 2285.
DOI: 10.1038/s41598-025-32077-9
Faktorová D., Valach M., Iorillo O., Akiyoshi B., Burger G., Lukeš J. (2026) Genetic Manipulation of Paradiplonema papillatum. In: P.A. Michels, M.L. Ginger, A. Karnkowska, L.I. McCall, A.M. Silber (Eds), Euglenozoa, Methods in Molecular Biology. Humana, New York 3014: 3–25.
DOI: 10.1007/978-1-0716-5146-9_1

Documents to download:
chapter_Faktorova_2026_Eughlenozoa_MetProt (pdf)
Hammond M., Chmelová L., Kuenzel N.A., Maurya A.K., Ferreira E.R., Puente V., Cadena L.R., Záhonová K., Dowle A., Mottram J., Nowack E.C.M., Lukeš J., Yurchenko V. (2026) Subcellular proteomics reveals a blueprint for endosymbiont integration in trypanosomatid Angomonas deanei. Nature Communications 17: 2241.
DOI: 10.1038/s41467-026-70084-0
Kostygov A. , Grybchuk D., Klocek D., Votýpka J., Mendoza-Roldan J.A., Lukeš J., Yurchenko V. (2026) The first RNA viruses detectedin a trypanosome. BMC Biology 24: 27.
DOI: 10.1186/s12915-025-02497-0
McDermott S.M., Lukeš J., Read L.K., Salavati R., Schnaufer A., Zimmer S., Carnes J., Ivens A., Poorinmohammad N., Savill N.J., Speijer D., Stuart K., Záhonová K., Borujeni P.M., Chen Z., Goode C., Sharma S.K., O’Hara L., Cruz-Reyes J. (2026) Stunning intricacies of RNA Editing Complexes RECC, RESC, and REH2C: functional organization, developmental regulation, and evolutionary history in kinetoplastid protists. Wiley Interdisciplinary Reviews-RNA 17: e70037.
DOI: 10.1002/wrna.70037
Obado S.O., Fridy P.C., Hegedüsová E., van Eeuwen T., Stein M.E., Zhang W., Jensen B.C., Chung C., Brillantes M., Glover L., Paris Z., Chait B.T., Field M., Rout M.P. (2026) Division of labor in trypanosome RNA processing and export through expanded Mex67 paralogs. Nucleic Acids Research 54: gkaf1443.
DOI: 10.1093/nar/gkaf1443
Prokopchuk G., Tashyreva D., Iorillo O., Akiyoshi B., Valach M., Lukeš J., Faktorová D. (2026) Preparation of Diplonemid Samples for Microscopy. In: P.A. Michels, M.L. Ginger, A. Karnkowska, L.I. McCall, A.M. Silber (Eds), Euglenozoa, Methods in Molecular Biology. Humana, New York, pp. 3013: 41–56.
DOI: 10.1007/978-1-0716-5142-1_3

Documents to download:
chapter_Prokopchuk_2026_Eughlenozoa_MetProt (pdf)
Tashyreva D., Prokopchuk G., Iorillo O., Valach M., Škodová-Sveráková I., Shin D.-W., Letts J.A., Burger G., Lukeš J., Faktorová D. (2026) Isolation and Cultivation of Diplonemids. In: P.A. Michels, M.L. Ginger, A. Karnkowska, L.I. McCall, A.M. Silber (Eds), Euglenozoa, Methods in Molecular Biology. Humana, New York, pp. 3013: 25–40.
DOI: 10.1007/978-1-0716-5142-1_2

Documents to download:
chapter_Tashyreva_2026_Eughlenozoa_MetProt (pdf)
Valach M., Burger G., Faktorová D., Lukeš J., Škodová-Sveráková I. (2026) Biochemistry of Diplonemids. In: P.A. Michels, M.L. Ginger, A. Karnkowska, L.I. McCall, A.M. Silber (Eds), Euglenozoa, Methods in Molecular Biology. Humana, New York, pp. 3014: 225–248.
DOI: 10.1007/978-1-0716-5146-9_15

Documents to download:
chapter_Valach_2026_Eughlenozoa_MetProt (pdf)
Akiyoshi B., Faktorová D., Lukeš J. (2025) Discovery of unique mitotic mechanisms in Paradiplonema papillatum. Open Biology 15: 250096.
DOI: 10.1098/rsob.250096

Documents to download:
Akiyoshi_2025_OpenBiol (pdf)
Čapková Pavlíková Z., Roithová A., Pospíšilová K., Záhonová K., Kachale A., Becker T., Durante I., Lukeš J., Paris Z., Beznosková P., Valášek L.S. (2025) Ribosomal A-site interactions with near-cognate tRNAs drive stop codon readthrough. Nature Structural and Molecular Biology 32: 662–674.
DOI: 10.1038/s41594-024-01450-z

Documents to download:
Capkova_2025_NatStrMolBiol (pdf)
Dacks J. (2025) Summer 2025 Editor-In-Chief Message Journal of Eukaryotic Microbiology 72: e70042.
DOI: 10.1111/jeu.70042

Documents to download:
Dacks_2025_JEM (pdf)
Fields O., Hammond M., Xu X., O'Neill E.C. (2025) Advances in euglenoid genomics: unravelling the fascinating biology of a complex clade Trends in Genetics 41: 251-260.
DOI: 10.1016/j.tig.2024.07.007

Documents to download:
Fields_2025_TrendsParasitol (pdf)
Galan A., Kraeva N., Záhonová K., Butenko A., Kostygov A., Paris Z., Pergner J., Claretta B., Fakih F., Saura A., Lukeš J., Yurchenko V. (2025) Converting Blastocrithidia nonstop, a trypanosomatid with non-canonical genetic code, into a genetically-tractable model. Molecular Microbiology 122: 586-592.
DOI: 10.1111/mmi.15365

Documents to download:
Galan_2025_MolMicrob (pdf)
Gerasimov E.S., Afonin D.A., Škodová-Sveráková I., Saura A., Trusina N., Gahura O., Zakharova A., Butenko A., Baráth P., Horváth A., Opperdoes F.R., Pérez-Morgai D., Zimmer S., Lukeš J., Yurchenko V. (2025) Evolutionary divergent kinetoplast genome structure and RNA editing patterns in the trypanosomatid Vickermania. Proceedings of the National Academy of Sciences of the United States of America 122: e2426887122.
DOI: 10.1073/pnas.2426887122

Documents to download:
Gerasimov_2025_PNAS (pdf)
Gray M., Valach M., Sarrasin M., Le Sieur F.-A., Lukeš J., Burger G. (2025) The mitochondrial proteome of diplonemids: from conventional pathways to eccentric RNA editing and transcript processing. BMC Genomics 26: 1099.
DOI: 10.1186/s12864-025-12233-1

Documents to download:
Gray_2025_BMCGenomics (pdf)
Grech J., Shinde A.P., Periz J., Singer M., Gras S., Forné I., Klingl A., Dacks J., Jimenez-Ruiz E., Meissner M. (2025) Tepsin and AP4 mediate transport from the trans-Golgi to the plant-like vacuole in toxoplasma. Journal of Cell Biology 224: e202312109.
DOI: 10.1083/jcb.202312109

Documents to download:
Grech_2025_JCB (pdf)
Hammond M., Iorillo O., Faktorová D., Svobodová M., Akiyoshi B., Licknack T., Poh Y.P., Lukeš J., Wideman J.G. (2025) Subcellular proteomics of the protist Paradiplonema papillatum reveals the digestive capacity of the cell membrane and the plasticity of peroxisomes across euglenozoans. PloS Biology 23: e3003319.
DOI: 10.1371/journal.pbio.3003319

Documents to download:
Hammond_2025_PlosBiol (pdf)
Hashimi H. (2025) Cell biology: A new dynamin superfamily protein remodels mitochondrial dynamics Current Biology 35: R218-R221.
DOI: 10.1016/j.cub.2025.01.069

Documents to download:
Hashimi_2025_CurrBiol (pdf)
Hashimi H., Gahura O., Pánek T. (2025) Bringing together but staying apart: decisive differences in animal and fungal mitochondrial inner membrane fusion Biological Reviews 100: 920-935.
DOI: 10.1111/brv.13168

Documents to download:
Hashimi 2024 BiolRevCambPhilosSoc (pdf)
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