List of publications

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Total found: 540 records
Obado S.O., Fridy P.C., Hegedüsová E., van Eeuwen T., Stein M.E., Zhang W., Jensen B.C., Chung C., Brillantes M., Glover L., Paris Z., Chait B.T., Field M., Rout M.P. (2026) Division of labor in trypanosome RNA processing and export through expanded Mex67 paralogs. Nucleic Acids Research 54: gkaf1443.
DOI: 10.1093/nar/gkaf1443
Akiyoshi B., Faktorová D., Lukeš J. (2025) Discovery of unique mitotic mechanisms in Paradiplonema papillatum. Open Biology 15: 250096.
DOI: 10.1098/rsob.250096

Documents to download:
Akiyoshi_2025_OpenBiol (pdf)
Čapková Pavlíková Z., Roithová A., Pospíšilová K., Záhonová K., Kachale A., Becker T., Durante I., Lukeš J., Paris Z., Beznosková P., Valášek L.S. (2025) Ribosomal A-site interactions with near-cognate tRNAs drive stop codon readthrough. Nature Structural and Molecular Biology 32: 662–674.
DOI: 10.1038/s41594-024-01450-z

Documents to download:
Capkova_2025_NatStrMolBiol (pdf)
Dacks J. (2025) Summer 2025 Editor-In-Chief Message Journal of Eukaryotic Microbiology 72: e70042.
DOI: 10.1111/jeu.70042

Documents to download:
Dacks_2025_JEM (pdf)
Fields O., Hammond M., Xu X., O'Neill E.C. (2025) Advances in euglenoid genomics: unravelling the fascinating biology of a complex clade Trends in Genetics 41: 251-260.
DOI: 10.1016/j.tig.2024.07.007

Documents to download:
Fields_2025_TrendsParasitol (pdf)
Galan A., Kraeva N., Záhonová K., Butenko A., Kostygov A., Paris Z., Pergner J., Claretta B., Fakih F., Saura A., Lukeš J., Yurchenko V. (2025) Converting Blastocrithidia nonstop, a trypanosomatid with non-canonical genetic code, into a genetically-tractable model. Molecular Microbiology 122: 586-592.
DOI: 10.1111/mmi.15365

Documents to download:
Galan_2025_MolMicrob (pdf)
Gerasimov E.S., Afonin D.A., Škodová-Sveráková I., Saura A., Trusina N., Gahura O., Zakharova A., Butenko A., Baráth P., Horváth A., Opperdoes F.R., Pérez-Morgai D., Zimmer S., Lukeš J., Yurchenko V. (2025) Evolutionary divergent kinetoplast genome structure and RNA editing patterns in the trypanosomatid Vickermania. Proceedings of the National Academy of Sciences of the United States of America 122: e2426887122.
DOI: 10.1073/pnas.2426887122

Documents to download:
Gerasimov_2025_PNAS (pdf)
Gray M., Valach M., Sarrasin M., Le Sieur F.-A., Lukeš J., Burger G. (2025) The mitochondrial proteome of diplonemids: from conventional pathways to eccentric RNA editing and transcript processing. BMC Genomics 26: 1099.
DOI: 10.1186/s12864-025-12233-1

Documents to download:
Gray_2025_BMCGenomics (pdf)
Grech J., Shinde A.P., Periz J., Singer M., Gras S., Forné I., Klingl A., Dacks J., Jimenez-Ruiz E., Meissner M. (2025) Tepsin and AP4 mediate transport from the trans-Golgi to the plant-like vacuole in toxoplasma. Journal of Cell Biology 224: e202312109.
DOI: 10.1083/jcb.202312109

Documents to download:
Grech_2025_JCB (pdf)
Hammond M., Iorillo O., Faktorová D., Svobodová M., Akiyoshi B., Licknack T., Poh Y.P., Lukeš J., Wideman J.G. (2025) Subcellular proteomics of the protist Paradiplonema papillatum reveals the digestive capacity of the cell membrane and the plasticity of peroxisomes across euglenozoans. PloS Biology 23: e3003319.
DOI: 10.1371/journal.pbio.3003319

Documents to download:
Hammond_2025_PlosBiol (pdf)
Hashimi H. (2025) Cell biology: A new dynamin superfamily protein remodels mitochondrial dynamics Current Biology 35: R218-R221.
DOI: 10.1016/j.cub.2025.01.069

Documents to download:
Hashimi_2025_CurrBiol (pdf)
Hashimi H., Gahura O., Pánek T. (2025) Bringing together but staying apart: decisive differences in animal and fungal mitochondrial inner membrane fusion Biological Reviews 100: 920-935.
DOI: 10.1111/brv.13168

Documents to download:
Hashimi 2024 BiolRevCambPhilosSoc (pdf)
Lazaridis I., Patterson N., Anthony D., Vyazov L., Fournier R., Ringbauer H., Olalde I., Khokhlov A.A., Kitov E.P., Flegontov P., Flegontova O., Szécsényi-Nagy A., Palamara P.F., Mallick S., Rohland N., Pinhasi R., Reich D. (2025) The genetic origin of the Indo-Europeans Nature 639: 132–142.
DOI: 10.1038/s41586-024-08531-5
Lukeš J., Čapková Pavlíková Z., Yurchenko V., Paris Z., Valášek L.S. (2025) Blastocrithidia—A Genetic Alien from the Planet Earth Cold Spring Harbor Perspectives in Biology 17: a041868.
DOI: 10.1101/cshperspect.a041868

Documents to download:
Lukes_2025_CSHPiB (pdf)
Lukeš J., Eliáš M., Kachale A., van der Gulik P.T.S., Speijer D. (2025) Natural and artificial variations of the standard genetic code. Current Biology 35: R1104–R1126.
DOI: 10.1016/j.cub.2025.09.071

Documents to download:
Lukes_2025_CurrBiol (pdf)
Matsuo L., Novák Vanclová A.M.G., Pomiankowski A., Lane N., Dacks J. (2025) Eukaryotic recombinases duplicated after divergence from known Asgard archaeal RadA: implications for the evolution of sex during eukaryogenesis. Genome Biology and Evolution 17: evaf240.
DOI: 10.1093/gbe/evaf240
Nearman A., Butenko A., Evans J.D., Palmer-Young E.C. (2025) Chromosome-level genome assembly of trypanosomatid parasite Lotmaria passim links chromosome duplication and divergence with infection of honey bees. BMC Genomics 26: 1083.
DOI: 10.1186/s12864-025-12082-y
Novák Vanclová A.M.G., Jackson C.L., Dacks J. (2025) Eukaryote-wide distribution of a family of longin domain-containing GAP complexes for small GTPases. Traffic 26: e70016.
DOI: 10.1111/tra.70016

Documents to download:
Novak_Vanclov_2025_Traffic (pdf)
Pendlebury M., Lukeš J., Hammond M. (2025) You can go your own way: The targeting signals of trypanosomatid parasites. PloS Pathogens 21: e1013326.
DOI: 10.1371/journal.ppat.1013326

Documents to download:
Pendlebury_2025_PlosPathogens (pdf)
Ribeiro P., Butenko A., Linke D., Ghanavi H.R., Meier J.I., Wahlberg N., Matos Maravi P. F. (2025) Pervasive horizontal transmission of Wolbachia in natural populations of closely related and widespread tropical skipper butterflies BMC Microbiology 22: 5.
DOI: 10.1186/s12866-024-03719-1

Documents to download:
Ribeiro_2025_BMCMicrobiol (pdf)
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